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Park Lab at Harvard Medical School

39 followers
Boston, MA
http://compbio.hms.harvard.edu

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nozzle nozzle Public

Nozzle is a report generation toolkit for data analysis pipelines implemented in R.

R 67 19
NGSCheckMate NGSCheckMate Public

Software program for checking sample matching for NGS data

Python 137 57
SigMA SigMA Public

Mutational signature analysis for low statistics SNV data

R 64 22

Repositories

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Showing 10 of 48 repositories

SMaHT_SNV_COLO829BLT50_HAPMAP Public

parklab/SMaHT_SNV_COLO829BLT50_HAPMAP’s past year of commit activity

Jupyter Notebook 0 1 1 1 Updated Mar 2, 2026
parklab.github.io Public

parklab/parklab.github.io’s past year of commit activity

HTML 0 1 0 0 Updated Feb 27, 2026
SMaHT_Regional_Categorization Public
This repository has the description of the hg38 genome categorization of easy, difficult, and extreme region.

parklab/SMaHT_Regional_Categorization’s past year of commit activity

1 0 0 0 Updated Feb 25, 2026
SMaHT_Tissue_Benchmark_SmallVariants Public

parklab/SMaHT_Tissue_Benchmark_SmallVariants’s past year of commit activity

0 0 0 0 Updated Feb 3, 2026
KidsFirst_TE_pediatric_cancer Public

parklab/KidsFirst_TE_pediatric_cancer’s past year of commit activity

R 0 0 0 0 Updated Jan 29, 2026
denovo_retroelements_kids_first Public

parklab/denovo_retroelements_kids_first’s past year of commit activity

Python 0 0 0 0 Updated Jan 9, 2026
NanoSeq_parkLab Public Forked from cancerit/NanoSeq
Analysis software for Nanorate Sequencing (NanoSeq) experiments -- forked over from Sanger Institute

parklab/NanoSeq_parkLab’s past year of commit activity

C++ 0 AGPL-3.0 15 0 0 Updated Dec 16, 2025
MosaicForecast Public
A mosaic detecting software based on phasing and random forest

parklab/MosaicForecast’s past year of commit activity

Python 70 MIT 21 7 2 Updated Dec 8, 2025
code-share Public
Repository to host shared code for the lab

parklab/code-share’s past year of commit activity

Shell 0 0 0 0 Updated Nov 10, 2025
EchoSV Public
A novel tool for accurately merging haplotype-based SV calls and comparing SVs across reference genomes

parklab/EchoSV’s past year of commit activity

Python 6 MIT 0 0 0 Updated Oct 9, 2025

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